Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015942565.1_cds_XP_016486005.1_76881
CDS Infomation

[gene=LOC107806374] [db_xref=GeneID:107806374] [protein=probable protein phosphatase 2C 4] [partial=5'] [protein_id=XP_016486005.1] [location=join(<7..717,853..966,1691..1955,2068..2183)] [gbkey=CDS]
Sequence

TGGGATGACAAGTCAGATTCATCTAATACTGATAATAGTACAATCCCAGCTTCGAGTTTG
GAAGTGAAAGAAGAACCAAATCAGATTTGTGATGATGATTTTACAAGAGATAGGACTAAA
GATGGTTGTTCAAGATGTGTTGAACAAGAGAATTATCCTTCAGCAAGAGAGGATCTTTGT
TTCGATTCGCGGTTAAAGAAAAAGAGGGGGAAGATTTCAAAGAGTAAGTACAGAGGATTA
GCAAAGAAATGGGAAGAAAATCAGAGGAGGTGGCGGTGCGAATGGGATAGGGAAAGATTA
GAGCTTGATAGGAGATTGAAGGAGCAGCTGAATGGAAATGGTTCTAATGGATCAGGATCA
GTTAATCATGCAGATGTATTGAAAGCTCTTTCTCAAGCATTGAAGAAAACAGAGGAGGCA
TATTTAGATCTAGCTGATAGGATGGTTATGGAGAATCCTGAATTAGCTTTGATGGGTTCT
TGTGTTCTTGTTATGTTAATGAAAGGAGAGGATGTTTATGTGATGAATGTAGGAGATAGT
CGAGCTGTGTTAGCTCAGAAGAAGGAGCCTAATCTCTGGAGCCAAGATTTGGAGCGGATC
AATGAAGAGACTTTGAATGATCTTGAGCTTTTAGATGGTGATGAGTCGAACAGTATACCT
AATTTAACTGCTAGTCAGCTTAGTACAGATCACAGCACATCCGTGGAAGAGGAAGTTCAA
AGAATAAGAAGTGAACATCCAGATGATGCATGTGCTTTGATGAATGACCGCGTGAAAGGT
TCTTTGAAGGTTACCCGGGCTTTTGGTGCTGGTTTCCTCAAGCAGCCTAAATGGAACAAT
GCGCTTCTGGAGATGTTCAGAATTGATTATATTGGAACTTCTCCCTACATCAGTTGTCTA
CCGTCTCTCCAGCATCACAGATTAGGGCCGAGAGACAGGTTTTTGATACTGTCATCTGAT
GGGCTTTATCAGTACTTCACAAATGAAGAAGCTGTTTTAGAAGTTGAACATTTCATCTCA
TGGTCACCAGATGGAGATCCTGCACAACATCTTATTGAGAAAGTATTGTTTCGCGCGGCC
AAAAGAGCTGGTTTGGAGTTTCACGAGTTGCTTGAAATTCCACAAGGGGATAGACGCCGG
TACCATGATGACGTTTCAATTATTGTTATTTCTTTGGAGGGGAGAATATGGAGATCCAGT
GCATAA

Peptide Sequence

PEP ID

XP_016486005.1
PEP Infomation

PREDICTED: probable protein phosphatase 2C 4, partial [Nicotiana tabacum]
Sequence

WDDKSDSSNTDNSTIPASSLEVKEEPNQICDDDFTRDRTKDGCSRCVEQENYPSAREDLC
FDSRLKKKRGKISKSKYRGLAKKWEENQRRWRCEWDRERLELDRRLKEQLNGNGSNGSGS
VNHADVLKALSQALKKTEEAYLDLADRMVMENPELALMGSCVLVMLMKGEDVYVMNVGDS
RAVLAQKKEPNLWSQDLERINEETLNDLELLDGDESNSIPNLTASQLSTDHSTSVEEEVQ
RIRSEHPDDACALMNDRVKGSLKVTRAFGAGFLKQPKWNNALLEMFRIDYIGTSPYISCL
PSLQHHRLGPRDRFLILSSDGLYQYFTNEEAVLEVEHFISWSPDGDPAQHLIEKVLFRAA
KRAGLEFHELLEIPQGDRRRYHDDVSIIVISLEGRIWRSSA

Transcript Sequence

Gene sequence data has not been registered.